Regarding ejection vis a vis your face: Yes, although designs like the FAMAS and the AUG (as I understand it) can be switched to either right or left-handed ejection, this *still* doesn't solve the problem. Because left-handed shooter may need to grab his rifle and shoot RIGHT handed around a corner, and right-handed shooter may have to grab his rifle and shoot LEFT handed around a corner. So merely having a "switchable" bolt ain't good enough, IMO. HOWEVER, if the FN2000 ejects "forward" as you say Handy, does this mean that you can avoid brass in the face shooting it either way, without modification? If so, then there's your answer...voila. (I'm not familiar with the FN2000 - I asked to buy the civilian version of it at my local gunshop but received nothing save quizzical stares).
Other issues:
-Reloading speed...not sure whether trained troops could reload as fast or if a bullpup is *necessarily* always going to be slower. Scientifically controlled testing needs to be done to see if it really is slower, *after thorough training*.
-Balance....although a bullpup does balance *differently* from what most people are used to, I don't think this is a real issue. I think a bullpup can balance equally "naturally* if that's what you're used - if what you train with.
-Sight radius...hmmm...I want to agree with Handy, that this is a non-issue, but I'm going to have to think on this some more...it does stand to reason that shorter rifle=shorter sight radius, given equal placement of eyes, relative to the rear of the rifle. So perhaps this is an issue, but it seems extremely minor to me. In fact, the sight radius thing can be anaylzed in the same way as the bayonet thing: Of course you have less reach/less sight radius in a shorter rifle. If longer is better, then let's go back to a 30" bbled rifle, then we'd have a hell of a reach for bayos, and a hell of a sight radius. So where do you draw the line? So I don't think they're big issues, but they are arguable issues, I suppose.
-Kbs....yes, if the action is under your chin, you ARE more likely to be injured in the event of a Kb, IINM. The question then becomes, are Kbs going to happen, ever, and if so, why, and with what frequency? Can they be eliminated through good ammo and training from a .mil perspective? If so, then this is a non-issue.
-Smoke, noise, fumes, in the face/hearing loss increase. Yes this is a definite issue, IMO. The weight of this issue, I'm not sure.