For non-magnified optics, there are two common mounting methods:
Absolute Co-Witness - the aimpoint rests on top of the front sight post, using the same cheek weld and point of aim.
Lower 1/3rd Co-Witness - the optic aim point floats above the iron sights, which occupy the lower third of the viewing aperture. To fire with iron sights requires a lowered cheek weld to pick up the front sight post through the rear right.
Do a bit of research online, and you can quickly find riser mounts for red dot and EOTech sights that will accommodate either setup.
Fixed FSB for magnified optics can cause ghosting, but again, a sufficiently tall riser can get you past this problem. What you will be dealing with, instead, is height-over-bore. This is a solvable problem, but will impact how your ballistics tabling and scope zero work together.